IMIS

In the next decades, the world market for plant-derived products is expected to grow exponentially. Not only do we rely on plants to feed the growing world population, but plants will also play a pivotal role in providing a significant portion of our energy needs, and in fulfilling our demand for renewable industrial resources. It is expected that (bio-)technological advances will further boost crop productivity and quality in a wider range of applications. In addition, new technologies will make it possible to develop agricultural practices in better harmony with the natural environment. The mission of PSB is to significantly contribute to solving the above-described grand challenges by laying the scientific foundation for innovations and by enabling that such innovations find their way to society at large. The research is framed in the following five thematic areas providing important challenges and opportunities for plant research:
- Sustainable bio-energy and bio-based products;
- Climate resilient crops;
- Plant diversity;
- Innovative crop care;
- Plants and human health.

The majority of the marine research is conducted in the Bioinformatics and Evolutionary Genomics group focusing on functional, structural and comparative genomics. This research targets species important for aquaculture, such as Artemia (in close collaboration with the laboratory of Aquaculture and Artemia Reference Center - Ugent), several pico-algae (collaboration with Observatoire Océanologique de Banyuls sur Mer, France) and Amoebophrya (collaboration with Roscoff Marine Station, France). Other marine topics include sea grasses and the genetic study of algae (e.g. diatoms) for which collaborations are established with the laboratory of Protistology and Aquatic Ecology and the Phycology research group (Ugent).

Publications (103)

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( 93 peer reviewed )

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Bogaert, K.A.; Blomme, J.; Beeckman, T.; De Clerck, O. (2022). Auxin's origin: do PILS hold the key? Trends Plant Sci. 27(3): 227-236. https://dx.doi.org/10.1016/j.tplants.2021.09.008, more
Gonçalves, M.F.M.; Hilário, S.; Van de Peer, Y.; Esteves, A.C.; Alves, A. (2022). Genomic and metabolomic analyses of the marine fungus Emericellopsis cladophorae: insights into saltwater adaptability mechanisms and its biosynthetic potential. Journal of Fungi 8(1): 31. https://dx.doi.org/10.3390/jof8010031, more
Liu, X.; Blomme, J.; Bogaert, K.A.; D'Hondt, S.; Wichard, T.; Deforce, D.; Van Nieuwerburgh, F.; De Clerck, O. (2022). Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction. BMC Plant Biol. 22(1): 19. https://dx.doi.org/10.1186/s12870-021-03361-3, more
Soiland-Reyes, S.; Sefton, P.; Crosas, M.; Castro, L.J.; Coppens, F.; Fernández, J.M.; Garijo, D.; Grüning, B.; La Rosa, M.; Leo, S.; Ó Carragáin, E.; Portier, M.; Trisovic, A.; RO-Crate Community; Groth, P.; Goble, C. (2022). Packaging research artefacts with RO-Crate. Data Science 5(2): 97-138. https://dx.doi.org/10.3233/ds-210053, more
Benites, L.F.; Bucchini, F.; Sanchez-Brosseau, S.; Grimsley, N.; Vandepoele, K.; Piganeau, G. (2021). Evolutionary genomics of sex-related chromosomes at the base of the green lineage. Genome Biology and Evolution 13(10): evab216. https://dx.doi.org/10.1093/gbe/evab216, more
Bilcke, G.; Van den Berge, K.; Bonneure, E.; Poulsen, N.; Bulankova, P.; Osuna-Cruz, C.M.; Dickenson, J.; Sabbe, K.; Pohnert, G.; Vandepoele, K.; Mangelinckx, S.; Clement, L.; De Veylder, L.; Vyverman, W. (2021). Mating type specific transcriptomic response to sex inducing pheromone in the pennate diatom Seminavis robusta. ISME J. 15(2): 562-576. https://dx.doi.org/10.1038/s41396-020-00797-7, more
Bilcke, G.; Osuna-Cruz, C.M.; Silva, M.S.; Poulsen, N.; D'hondt, S.; Bulankova, P.; Vyverman, W.; De Veylder, L.; Vandepoele, K. (2021). Diurnal transcript profiling of the diatom Seminavis robusta reveals adaptations to a benthic lifestyle. Plant J. 107(1): 315-336. https://dx.doi.org/10.1111/tpj.15291, more
Bilcke, G.; Van Craenenbroeck, L.; Castagna, A.; Osuna-Cruz, C.M.; Vandepoele, K.; Sabbe, K.; De Veylder, L.; Vyverman, W. (2021). Light intensity and spectral composition drive reproductive success in the marine benthic diatom Seminavis robusta. NPG Scientific Reports 11(1): 17560. https://dx.doi.org/10.1038/s41598-021-92838-0, more
Blomme, J.; Liu, X.; Jacobs, T.B.; De Clerck, O. (2021). A molecular toolkit for the green seaweed Ulva mutabilis. Plant Physiol. 186(3): 1442-1454. https://dx.doi.org/10.1093/plphys/kiab185, more
Bogaert, K.; Blomme, J.; Blommaert, L.; Ljung, K.; Beeckman, T.; De Clerck, O. (2021). Auxin function in the brown alga Dictyota dichotoma: a case for a deep origin of auxin transport? Phycologia 60(sup1): 6-6, more
Bulankova, P.; Sekulić, M.; Jallet, D.; Nef, C.; Van Oosterhout, C.; Delmont, T.O.; Vercauteren, I.; Osuna-Cruz, C.M.; Vancaester, E.; Mock, T.; Sabbe, K.; Daboussi, F.; Bowler, C.; Vyverman, W.; Vandepoele, K.; De Veylder, L. (2021). Mitotic recombination between homologous chromosomes drives genomic diversity in diatoms. Curr. Biol. 31(15): 3221-3232. https://dx.doi.org/10.1016/j.cub.2021.05.013, more
De Vos, S.; Rombauts, S.; Coussement, L.; Dermauw, W.; Vuylsteke, M.; Sorgeloos, P.; Clegg, J.S.; Nambu, Z.; Van Nieuwerburgh, F.; Norouzitallab, P.; Van Leeuwen, T.; De Meyer, T.; Van Stappen, G.; Van de Peer, Y.; Bossier, P. (2021). The genome of the extremophile Artemia provides insight into strategies to cope with extreme environments. BMC Genom. 22(1): 635. https://dx.doi.org/10.1186/s12864-021-07937-z, more
Farhat, S.; Le, P.; Kayal, E.; Noel, B.; Bigeard, E.; Corre, E.; Maumus, F.; Florent, I.; Alberti, A.; Aury, J.-M.; Barbeyron, T.; Cai, R.; Da Silva, C.; Istace, B.; Labadie, K.; Marie, D.; Mercier, J.; Rukwavu, T.; Szymczak, J.; Tonon, T.; Alves-de-Souza, C.; Rouzé, P.; Van de Peer, Y.; Wincker, P.; Rombauts, S.; Porcel, B.M.; Guillou, L. (2021). Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp. BMC Biology 19(1): 1. https://hdl.handle.net/10.1186/s12915-020-00927-9, more
Farhat, S.; Le, P.; Kayal, E.; Noel, B.; Bigeard, E.; Corre, E.; Maumus, F.; Florent, I.; Alberti, A.; Aury, J.-M.; Barbeyron, T.; Cai, R.; Da Silva, C.; Istace, B.; Labadie, K.; Marie, D.; Mercier, J.; Rukwavu, T.; Szymczak, J.; Tonon, T.; Alves-de-Souza, C.; Rouzé, P.; Van de Peer, Y.; Wincker, P.; Rombauts, S.; Porcel, B.M.; Guillou, L. (2021). Author correction to: Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp. BMC Biology 19(1): 209. https://dx.doi.org/10.1186/s12915-021-01144-8, more
Gonçalves, M.F.M.; Hilário, S.; Tacão, M.; Van de Peer, Y.; Alves, A.; Esteves, A.C. (2021). Genome and metabolome MS-based mining of a marine strain of Aspergillus affinis. Journal of Fungi 7(12): 1091. https://dx.doi.org/10.3390/jof7121091, more
Labarre, A.; López-Escardó, D.; Latorre, F.; Leonard, G.; Bucchini, F.; Obiol, A.; Cruaud, C.; Sieracki, M.E.; Jaillon, O.; Wincker, P.; Vandepoele, K.; Logares, R.; Massana, R. (2021). Comparative genomics reveals new functional insights in uncultured MAST species. ISME J. 15: 1767-1781. https://hdl.handle.net/10.1038/s41396-020-00885-8, more
Liu, X.; Blomme, J.; Bogaert, K.; De Clerck, O. (2021). Gametogenesis in the green seaweed Ulva mutabilis coincides with massive transcriptional restructuring. Phycologia 60(sup1): 7-7, more
Massana, R.; Labarre, A.; López-Escardó, D.; Obiol, A.; Bucchini, F.; Hackl, T.; Fischer, M.G.; Vandepoele, K.; Tikhonenkov, D.V.; Husnik, F.; Keeling, P.J. (2021). Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate. ISME J. 15(1): 154-167. https://hdl.handle.net/10.1038/s41396-020-00770-4, more
Baudry, L.; Guiglielmoni, N.; Marie-Nelly, H.; Cormier, A.; Marbouty, M.; Avia, K.; Mie, Y.L.; Godfroy, O.; Sterck, L.; Cock, J.M.; Zimmer, C.; Coelho, S.M.; Koszul, R. (2020). instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder. Genome Biol. 21(1): 148. https://hdl.handle.net/10.1186/s13059-020-02041-z, more
Blommaert, L.; Vancaester, E.; Huysman, M.J.J.; Osuna-Cruz, C.M.; D'hondt, S.; Lavaud, J.; Lepetit, B.; Winge, P.; Bones, A.M.; Vandepoele, K.; Vyverman, W.; Sabbe, K. (2020). Light regulation of LHCX genes in the benthic diatom Seminavis robusta. Front. Mar. Sci. 7: 192. https://hdl.handle.net/10.3389/fmars.2020.00192, more
Bousquet, L.; Hemon, C.; Malburet, P.; Bucchini, F.; Vandepoele, K.; Grimsley, N.; Moreau, H.; Echeverria, M. (2020). The medium-size noncoding RNA transcriptome of Ostreococcus tauri, the smallest living eukaryote, reveals a large family of small nucleolar RNAs displaying multiple genomic expression strategies. NAR Genomics and Bioinformatics 2(4): lqaa080. https://dx.doi.org/10.1093/nargab/lqaa080, more
De Saeger, J.; Van Praet, S.; Vereecke, D.; Park, J.; Jacques, S.; Han, T.; Depuydt, S. (2020). Toward the molecular understanding of the action mechanism of Ascophyllum nodosum extracts on plants. J. Appl. Phycol. 32(1): 573-597. https://hdl.handle.net/10.1007/s10811-019-01903-9, more
Del Cortona, A.; Jackson, C.J.; Bucchini, F.; Van Bel, M.; D'hondt, S.; Skaloud, P.; Delwiche, C.F.; Knoll, A.H.; Raven, J.A.; Verbruggen, H.; Vandepoele, K.; De Clerck, O.; Leliaert, F. (2020). Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds. Proc. Natl. Acad. Sci. U.S.A. 117(5): 2551-2559. https://dx.doi.org/10.1073/pnas.1910060117, more
Jueterbock, A.; Boström, C.; Coyer, J.A.; Olsen, J.L.; Kopp, M.; Dhanasiri, A.K.S.; Smolina, I.; Arnaud-Haond, S.; Van de Peer, Y.; Hoarau, G. (2020). The seagrass methylome is associated with variation in photosynthetic performance among clonal shoots. Front. Plant Sci. 11: 571646. https://hdl.handle.net/10.3389/fpls.2020.571646, more
Li, L.; Wang, S.; Wang, H.; Sahu, S.K.; Marin, B.; Li, H.; Xu, Y.; Liang, H.; Li, Z.; Cheng, S.; Reder, T.; Çebi, Z.; Wittek, S.; Petersen, M.; Melkonian, B.; Du, H.; Yang, H.; Wang, J.; Wong, G.K.-S.; Xu, X.; Liu, X.; Van de Peer, Y.; Melkonian, M.; Liu, H. (2020). Author correction: The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants. Nature Ecology & Evolution 4(9): 1280-1280. https://dx.doi.org/10.1038/s41559-020-1268-5, more
Li, Linzhou; Wang, Sibo; Wang, Hongli; Sahu, Sunil Kumar; Marin, Birger; Li, Haoyuan; Xu, Yan; Liang, Hongping; Li, Zhen; Cheng, Shifeng; Reder, Tanja; Çebi, Zehra; Wittek, Sebastian; Petersen, Morten; Melkonian, Barbara; Du, Hongli; Yang, Huanming; Wang, Jian; Wong, Gane Ka-Shu; Xu, Xun; Liu, Xin; Van de Peer, Yves; Melkonian, Michael; Liu, Huan (2020). The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants. Nature Ecology & Evolution 4(9): 1220-1231. https://dx.doi.org/10.1038/s41559-020-1221-7, more
Osuna-Cruz, C.M.; Bilcke, G.; Vancaester, E.; De Decker, S.; Bones, A.M.; Winge, P.; Poulsen, N.; Bulankova, P.; Verhelst, B.; Audoor, S.; Belisova, D.; Pargana, A.; Russo, M.; Stock, F.; Cirri, E.; Brembu, T.; Pohnert, G.; Piganeau, G.; Ferrante, M.I.; Mock, T.; Sterck, L.; Sabbe, K.; De Veylder, L.; Vyverman, W.; Vandepoele, K. (2020). Author correction: The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms. Nature Comm. 11: 5331. https://dx.doi.org/10.1038/s41467-020-19222-w, more
Osuna-Cruz, C.M.; Bilcke, G.; Vancaester, E.; De Decker, S.; Bones, A.M.; Winge, P.; Poulsen, N.; Bulankova, P.; Verhelst, B.; Audoor, S.; Belisova, D.; Pargana, A.; Russo, M.; Stock, F.; Cirri, E.; Brembu, T.; Pohnert, G.; Piganeau, G.; Ferrante, M.I.; Mock, T.; Sterck, L.; Sabbe, K.; De Veylder, L.; Vyverman, W.; Vandepoele, K. (2020). The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms. Nature Comm. 11(1): 3320. https://hdl.handle.net/10.1038/s41467-020-17191-8, more
Pereira-Santana, A.; Gamboa-Tuz, S.D.; Zhao, T.; Schranz, M.E.; Vinuesa, P.; Bayona, A.; Rodriguez-Zapata, L.C.; Castano, E. (2020). Fibrillarin evolution through the Tree of Life: comparative genomics and microsynteny network analyses provide new insights into the evolutionary history of Fibrillarin. PLoS computational biology 16(10): e1008318. https://hdl.handle.net/10.1371/journal.pcbi.1008318, more
Stock, F.; Bilcke, G.; De Decker, S.; Osuna-Cruz, C.M.; Van den Berge, K.; Vancaester, E.; De Veylder, L.; Vandepoele, K.; Mangelinckx, S.; Vyverman, W. (2020). Distinctive growth and transcriptional changes of the diatom Seminavis robusta in response to quorum sensing related compounds. Front. Microbiol. 11: 1240. https://dx.doi.org/10.3389/fmicb.2020.01240, more
Vancaester, E.; Depuydt, T.; Osuna-Cruz, C.M.; Vandepoele, K. (2020). Comprehensive and functional analysis of horizontal gene transfer events in diatoms. Mol. Biol. Evol. 37(11): 3243-3257. https://hdl.handle.net/10.1093/molbev/msaa182, more
Yau, S.; Krasovec, M.; Benites, L.F.; Rombauts, S.; Groussin, M.; Vancaester, E.; Aury, J.-M.; Derelle, E.; Desdevises, Y.; Escande, M.-L.; Grimsley, N.; Guy, J.; Moreau, H.; Sanchez-Brosseau, S.; Van de Peer, Y.; Vandepoele, K.; Gourbière, S.; Piganeau, G. (2020). Virus-host coexistence in phytoplankton through the genomic lens. Science Advances 6(14): eaay2587. https://hdl.handle.net/10.1126/sciadv.aay2587, more
Annunziata, R.; Ritter, A.; Fortunato, A.E.; Manzotti, A.; Cheminant-Navarro, S.; Agier, N.; Huysman, M.J.J.; Winge, P.; Bones, A.M.; Bouget, F.-Y.; Lagomarsino, M.C.; Bouly, J.-P.; Falciatore, A. (2019). bHLH-PAS protein RITMO1 regulates diel biological rhythms in the marine diatom Phaeodactylum tricornutum. Proc. Natl. Acad. Sci. U.S.A. 116(26): 13137-13142. https://dx.doi.org/10.1073/pnas.1819660116, more
Bogaert, K.A.; Blommaert, L.; Ljung, K.; Beeckman, T.; De Clerck, O. (2019). Auxin function in the brown alga Dictyota dichotoma. Plant Physiol. 179(1): 280-299. https://dx.doi.org/10.1104/pp.18.01041, more
Cirri, E.; De Decker, S.; Bilcke, G.; Werner, M.; Osuna-Cruz, C.M.; De Veylder, L.; Vandepoele, K.; Werz, O.; Vyverman, W.; Pohnert, G. (2019). Associated bacteria affect sexual reproduction by altering gene expression and metabolic processes in a biofilm inhabiting diatom. Front. Microbiol. 10: 1790. https://dx.doi.org/10.3389/fmicb.2019.01790, more
Patil, S.; Moeys, S.; von Dassow, P.; Huysman, M.J.J.; Mapleson, D.; De Veylder, L.; Sanges, R.; Vyverman, W.; Montresor, M.; Ferrante, M.I. (2019). Correction to: identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudonitzschia multistriata and Seminavis robusta. BMC Genom. 20: 544. https://dx.doi.org/10.1186/s12864-019-5942-4, more
Tan, M.P.; Wong, L.L.; Razali, S.A.; Afiqah-Aleng, N.; Nor, S.A.M.; Sung, Y.Y.; Van de Peer, Y.; Sorgeloos, P.; Danish-Daniel, M. (2019). Applications of next-generation sequencing technologies and computational tools in molecular evolution and aquatic animals conservation studies: a short review. Evolutionary Bioinformatics 15: 1-5. https://dx.doi.org/10.1177/1176934319892284, more
De Clerck, O.; Kao, S.-M.; Bogaert, K.A.; Blomme, J.; Foflonker, F.; Kwantes, M.; Vancaester, E.; Vanderstraeten, L.; Aydogdu, E.; Boesger, J.; Califano, G.; Charrier, B.; Clewes, R.; Del Cortona, A.; D’Hondt, S.; Fernandez-Pozo, N.; Gachon, C.M.; Hanikenne, M.; Lattermann, L.; Leliaert, F.; Liu, X.; Maggs, C.A.; Popper, Z.A.; Raven, J.A.; Van Bel, M.; Wilhelmsson, P.K.I.; Bhattacharya, D.; Coates, J.C.; Rensing, S.A.; Van Der Straeten, D.; Vardi, A.; Sterck, L.; Vandepoele, K.; Van de Peer, Y.; Wichard, T.; Bothwell, J.H. (2018). Insights into the evolution of multicellularity from the sea lettuce genome. Curr. Biol. 28(18): 2921-2933.e5. https://dx.doi.org/10.1016/j.cub.2018.08.015, more
Phoma, S.; Vikram, S.; Jansson, J.K.; Ansorge, I.J.; Cowan, D.A.; Van de Peer, Y.; Makhalanyane, T.P. (2018). Agulhas Current properties shape microbial community diversity and potential functionality. NPG Scientific Reports 8: 10542. https://dx.doi.org/10.1038/s41598-018-28939-0, more
Blommaert, L.; Huysman, M.J.J.; Vyverman, W.; Lavaud, J.; Sabbe, K. (2017). Contrasting NPQ dynamics and xanthophyll cycling in a motile and a non-motile intertidal benthic diatom. Limnol. Oceanogr. 62(4): 1466-1479. https://dx.doi.org/10.1002/lno.10511, more
Bogaert, K.A.; Beeckman, T.; De Clerck, O. (2017). Egg activation-triggered shape change in the Dictyota dichotoma (Phaeophyceae) zygote is actin-myosin and secretion dependent. Ann. Bot. 120(4): 529-538. https://dx.doi.org/10.1093/aob/mcx085, more
Cormier, A.; Avia, K.; Sterck, L.; Derrien, T.; Wucher, V.; Andres, G.; Monsoor, M.; Godfroy, O.; Lipinska, A.; Perrineau, M.-M.; Van de Peer, Y.; Hitte, C.; Corre, E.; Coelho, S.M.; Cock, J.M. (2017). Re-annotation, improved large-scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga Ectocarpus. New Phytol. 214(1): 219-232. https://dx.doi.org/10.1111/nph.14321, more
De Clerck, O.; Kao, S.-M.; Sterck, L.; Wichard, T.; Bothwell, J.H. (2017). The annotation of sea lettuce Ulva genome: a green algal blooming species. Phycologia 56(Supplement 4): 40-41, more
Del Cortona, A.; Leliaert, F.; Bogaert, K.A.; Turmel, M.; Boedeker, C.; Janouskovec, J.; López-Bautista, J.M.; Verbruggen, H.; Vandepoele, K.; De Clerck, O. (2017). The plastid genome in Cladophorales green algae is encoded by hairpin chromosomes. Curr. Biol. 27(24): 3771-3782. https://dx.doi.org/10.1016/j.cub.2017.11.004, more
Harikrishnan, S.L.; Badstoeber, J.; Van Bel, M.; Badis, Y.; Zambounis, A.; Strittmatter, M.; Sterck, L.; Neuhauser, S.; Gachon, C.M.M.; Van de Peer, Y. (2017). Transcriptome analysis of compatible and incompatible interactions of Ectocarpus with Eurychasma dicksonii using RNA-sequencing. Phycologia 56(4 (Suppl.)): 74-75. https://dx.doi.org/10.2216/0031-8884-56.sp4.1, more
Matthijs, M.; Fabris, M.; Obata, T.; Foubert, I.; Franco-Zorrilla, M.; Solano, R.; Fernie, R.; Vyverman, W.; Goossens, A. (2017). The transcription factor bZIP14 regulates the TCA cycle in the diatom Phaeodactylum tricornutum. EMBO J. 36(11): 1559-1576. https://dx.doi.org/10.15252/embj.201696392, more
Van Malderen, S.J.M.; Laforce, B.; Van Acker, T.; Nys, C.; De Rijcke, M.; de Rycke, R.; De Bruyne, M.; Boone, M.N.; De Schamphelaere, K.; Borovinskaya, O.; De Samber, B.; Vincze, L.; Vanhaecke, F. (2017). Three-dimensional reconstruction of the tissue-specific multielemental distribution within Ceriodaphnia dubiavia multimodal registration using laser ablation ICP-mass spectrometry and X-ray spectroscopic techniques. Anal. Chem. 89(7): 4161-4168. https://dx.doi.org/10.1021/acs.analchem.7b00111, more
Bogaert, K.; Beeckman, T.; De Clerck, O. (2016). Abiotic regulation of growth and fertility in the sporophyte of Dictyota dichotoma (Hudson) JV Lamouroux (Dictyotales, Phaeophyceae). J. Appl. Phycol. 28(5): 2915-2924. https://dx.doi.org/10.1007/s10811-016-0801-z, more
Calegario, G.; Pollier, J.; Arendt, P.; de Oliveira, L.S.; Thompson, C.; Soares, A.R.; Pereira, R.C.; Goossens, A.; Thompson, F.L. (2016). Cloning and functional characterization of cycloartenol synthase from the red seaweed Laurencia dendroidea. PLoS One 11(11): e0165954. https://dx.doi.org/10.1371/journal.pone.0165954, more
Fortunato, A.E.; Jaubert, M.; Enomoto, G.; Bouly, J.-P.; Raniello, R.; Thaler, M.; Malviya, S.; Bernardes, J.S.; Rappaport, F.; Gentili, B.; Huysman, M.J.J.; Carbone, A.; Bowler, C.; d'Alcalà, M.R.; Ikeuchi, M.; Falciatore, A. (2016). Diatom phytochromes reveal the existence of far-red-light-based sensing in the ocean. Plant Cell 28(3): 616-628. https://dx.doi.org/10.1105/tpc.15.00928, more
García-Gómez, C.; Mata, M.T.; Van Breusegem, F.; Segovia, M. (2016). Low-steady-state metabolism induced by elevated CO₂ increases resilience to UV radiation in the unicellular green-algae Dunaliella tertiolecta. Environ. Exp. Bot. 132: 163-174. https://dx.doi.org/10.1016/j.envexpbot.2016.09.001, more
Kim, J; Fabris, M.; Baart, G.; Kim, K; Goossens, A.; Vyverman, W.; Falkowski, G; Lun, S (2016). Flux balance analysis of primary metabolism in the diatom Phaeodactylum tricornutum. Plant J. 85(1): 161-176. dx.doi.org/10.1111/tpj.13081, more
Matthijs, M.; Fabris, M.; Broos, S.; Vyverman, W.; Goossens, A. (2016). Profiling of the early nitrogen stress response in the diatom Phaeodactylum tricornutum reveals a novel family of RING-domain transcription factors. Plant Physiol. 170(1): 489-498. https://dx.doi.org/10.1104/pp.15.01300, more
Moeys, S.; Frenkel, J.; Lembke, C.; Gillard, J.; Devos, V.; Van den Berge, K.; Bouillon, B.; Huysman, M.J.J.; De Decker, S.; Scharf, J.; Bones, A.; Brembu, T.; Winge, P.; Sabbe, K.; Vuylsteke, M.; Clement, L.; De Veylder, L.; Pohnert, G.; Vyverman, W. (2016). A sex-inducing pheromone triggers cell cycle arrest and mate attraction in the diatom Seminavis robusta. NPG Scientific Reports 6(19252): 13 pp. https://dx.doi.org/10.1038/srep19252, more
Annunziata, R.; Fortunato, A.; Navarro, S.; Huysman, M.J.J.; Petroutsos, D.; Brembu, T.; Winge, P.; Atle, B.; Finazzi, G.; Lagomarsino, M.; Falciatore, A. (2015). The circadian clock in the diatom Phaeodactylum tricornutum. Eur. J. Phycol. 50(Supplement 1): 64-65, more
Bogaert, K.A.; Beeckman, T.; De Clerck, O. (2015). Photopolarization of Fucus zygotes is determined by time sensitive vectorial addition of environmental cues during axis amplification. Front. Plant Sci. 6: 8 pp. dx.doi.org/10.3389/fpls.2015.00026, more
Busschaert, P.; Frans, I.; Crauwels, S.; Zhu, B.; Willems, K.; Bossier, P.; Michiels, C.; Verstrepen, K.; Lievens, B.; Rediers, H. (2015). Comparative genome sequencing to assess the genetic diversity and virulence attributes of 15 Vibrio anguillarum isolates. J. Fish Dis. 38(9): 795-807. https://dx.doi.org/10.1111/jfd.12290, more
Cabioch, L.; Ritter, A.; Goulitquer, S.; Potin, P.; Faugeron, S.; Leblanc, C. (2015). Chemical signaling and defense in brown algal kelps during interactions with herbivores. Eur. J. Phycol. 50(supplement 1): 215-215, more
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Huysman, M.J.J.; Fortunato, A.E.; Matthijs, M.; Van den Daele, H.; Inzé, D.; Bowler, C.; Kroth, P.G.; Falciatore, A.; Vyverman, W. (2012). Control of light-dependent cell cycle onset by the diatom-specific cyclin dsCYC2, in: Sabbe, K. et al. (Ed.) Twenty-second International Diatom Symposium, Aula Academica, Ghent, 26-31 August 2012. Abstracts. VLIZ Special Publication, 58: pp. 52, more

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